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1

Les riz en Afrique: diversité génétique, relations interspécifiques et évolution

Bezançon, Gilles, Causse, Matilde, Ghesquiere, Alain, De Kochko, Alexandre, Pham, Jean-Louis, Second, Gérard

Journal:

Bulletin de la Société Botanique de France. Actualités Botaniques

Year:

1989

File:

PDF, 856 KB

1989

2

Chlorogenic acid content swap during fruit maturation in Coffea pseudozanguebariae: Qualitative comparison with leaves

Claire Bertrand, Michel Noirot, Sylvie Doulbeau, Alexandre de Kochko, Serge Hamon, Claudine Campa

Journal:

Year:

2003

Language:

english

File:

PDF, 131 KB

english, 2003

3

Phylogeography and niche modelling of the relict plant Amborella trichopoda (Amborellaceae) reveal multiple Pleistocene refugia in New Caledonia

Poncet, Valérie, Munoz, François, Munzinger, Jérôme, Pillon, Yohan, Gomez, Céline, Couderc, Marie, Tranchant-Dubreuil, Christine, Hamon, Serge, de Kochko, Alexandre

Journal:

Molecular Ecology

Year:

2013

Language:

english

File:

PDF, 3.99 MB

english, 2013

4

SSR mining in coffee tree EST databases: potential use of EST–SSRs as markers for theCoffeagenus

Valérie Poncet, Myriam Rondeau, Christine Tranchant, Anne Cayrel, Serge Hamon, Alexandre de Kochko, Perla Hamon

Journal:

Molecular Genetics and Genomics

Year:

2006

Language:

english

File:

PDF, 707 KB

english, 2006

5

Development of transgenic rice plants expressing maize anthocyanin genes and increased blast resistance

Madhuri Gandikota, Alexandre de Kochko, Lili Chen, Nagabhushana Ithal, Claude Fauquet, Arjula R. Reddy

Journal:

Molecular Breeding

Year:

2001

Language:

english

File:

PDF, 146 KB

english, 2001

6

Rice plant (Oryza sativa L.) containing Rice tungro spherical virus (RTSV) coat protein transgenes are resistant to virus infection

Elumalai Sivamani, Hervé Huet, Ping Shen, Ching Ang Ong, Alexandre de Kochko, Claude Fauquet, Roger N. Beachy

Journal:

Molecular Breeding

Year:

1999

Language:

english

File:

PDF, 88 KB

english, 1999

7

Metabolic pathways in tropical dicotyledonous albuminous seeds: Coffea arabica as a case study

Thierry Joët, Andréina Laffargue, Jordi Salmona, Sylvie Doulbeau, Frédéric Descroix, Benoît Bertrand, Alexandre de Kochko, Stéphane Dussert

Journal:

New Phytologist

Year:

2009

Language:

english

File:

PDF, 2.79 MB

english, 2009

8

10.1038/3511

Fauquet, Claude M., Chen, Lili, Marmey, Philippe, Taylor, Nigel J., Brizard, Jean-Paul, Espinoza, Celia, D'Cruz, Patricia, Huet, Hervé, Zhang, Shiping, Kochko, Alexandre de, Beachy, Roger N.

Journal:

Nature Biotechnology

Year:

1998

Language:

english

File:

PDF, 187 KB

english, 1998

9

Protein slot blotting: An easy, rapid and reliable technique to identify the expression of a protein in transgenic plants

Alexandre de Kochko, Rongda Qu, Philippe Marmey, Iann Rance, Claude Fauquet, Roger N. Beachy

Journal:

Plant Molecular Biology Reporter

Year:

1994

Language:

english

File:

PDF, 387 KB

english, 1994

10

Large distribution and high sequence identity of aCopia-type retrotransposon in angiosperm families

Dias, Elaine Silva, Hatt, Clémence, Hamon, Serge, Hamon, Perla, Rigoreau, Michel, Crouzillat, Dominique, Carareto, Claudia Marcia Aparecida, de Kochko, Alexandre, Guyot, Romain

Journal:

Plant Molecular Biology

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

11

Analysis of a Large Number of Independent Transgenic Rice Plants Produced by the Biolistic Method

Rongda Qu, Alexandre De Kochko, Lanying Zhang, Philippe Marmey, Liangcai Li, Wenzhong Tian, Shiping Zhang, Claude M. Fauquet and Roger N. Beachy

Journal:

In Vitro Cellular & Developmental Biology - Plant

Year:

1996

Language:

english

File:

PDF, 2.23 MB

english, 1996

12

Rice Tungro Bacilliform Virus Open Reading Frame 3 Encodes a Single 37-kDa Coat Protein

Philippe Marmey, Brian Bothner, Emmanuel Jacquot, Alexandre de Kochko, Ching Ang Ong, Pierre Yot, Gary Siuzdak, Roger N. Beachy, Claude M. Fauquet

Journal:

Year:

1999

Language:

english

File:

PDF, 153 KB

english, 1999

13

Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephoraandSolanumSp.) and rosid (Vitis vinifera) clades

Guyot, Romain, Lefebvre-Pautigny, Florent, Tranchant-Dubreuil, Christine, Rigoreau, Michel, Hamon, Perla, Leroy, Thierry, Hamon, Serge, Poncet, Valérie, Crouzillat, Dominique, de Kochko, Alexandre

Journal:

Year:

2012

Language:

english

File:

PDF, 1.91 MB

english, 2012

14

Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons

Dupeyron, Mathilde, de Souza, Rogerio Fernandes, Hamon, Perla, de Kochko, Alexandre, Crouzillat, Dominique, Couturon, Emmanuel, Domingues, Douglas Silva, Guyot, Romain

Journal:

Molecular Genetics and Genomics

Year:

2017

Language:

english

File:

PDF, 2.33 MB

english, 2017

15

Influence of environmental factors, wet processing and their interactions on the biochemical composition of green Arabica coffee beans

Thierry Joët, Andréina Laffargue, Frédéric Descroix, Sylvie Doulbeau, Benoît Bertrand, Alexandre de kochko, Stéphane Dussert

Journal:

Year:

2010

Language:

english

File:

PDF, 346 KB

english, 2010

16

Functional organization of the cassava vein mosaic virus (CsVMV) promoter

Bertrand Verdaguer, Alexandre de Kochko, Charles I. Fux, Roger N. Beachy, Claude Fauquet

Journal:

Plant Molecular Biology

Year:

1998

Language:

english

File:

PDF, 220 KB

english, 1998

17

MoccaDB - an integrative database for functional, comparative and diversity studies in theRubiaceaefamily

Olga Plechakova, Christine Tranchant-Dubreuil, Fabrice Benedet, Marie Couderc, Alexandra Tinaut, Véronique Viader, Petra De Block, Perla Hamon, Claudine Campa, Alexandre de Kochko, Serge Hamon, Valéri

Journal:

BMC Plant Biology

Year:

2009

Language:

english

File:

PDF, 1.71 MB

english, 2009

18

Partial desiccation of mature embryo-derived calli, a simple treatment that dramatically enhances the regeneration ability of indica rice

Iann M. Rancé, Wenzhong Tian, Helena Mathews, Alexandre de Kochko, Roger N. Beachy, Claude Fauquet

Journal:

Plant Cell Reports

Year:

1994

Language:

english

File:

PDF, 1012 KB

english, 1994

19

Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea)

Qingyi Yu, Romain Guyot, Alexandre de Kochko, Anne Byers, Rafael Navajas-Pérez, Brennick J. Langston, Christine Dubreuil-Tranchant, Andrew H. Paterson, Valérie Poncet, Chifumi Nagai, Ray Ming

Journal:

The Plant Journal

Year:

2011

Language:

english

File:

PDF, 1.33 MB

english, 2011

20

Structure and Distribution of Centromeric Retrotransposons at Diploid and Allotetraploid Coffea Centromeric and Pericentromeric Regions

de Castro Nunes, Renata, Orozco-Arias, Simon, Crouzillat, Dominique, Mueller, Lukas A., Strickler, Suzy R., Descombes, Patrick, Fournier, Coralie, Moine, Deborah, de Kochko, Alexandre, Yuyama, Priscil

Journal:

Frontiers in Plant Science

Year:

2018

Language:

english

File:

PDF, 4.89 MB

english, 2018

21

Geographical gradients in the genome size variation of wild coffee trees (Coffea)native to Africa and Indian Ocean islands

Norosoa J. Razafinarivo, Jean-Jacques Rakotomalala, Spencer C. Brown, Mickael Bourge, Serge Hamon, Alexandre de Kochko, Valérie Poncet, Christine Dubreuil-Tranchant, Emmanuel Couturon, Romain Guyot, P

Journal:

Tree Genetics & Genomes

Year:

2012

Language:

english

File:

PDF, 1.00 MB

english, 2012

22

The mechanism of action of α-amylase from Lactobacillus fermentum on maltooligosaccharides

Pascale Talamond, Michel Noirot, Alexandre de Kochko

Journal:

Journal of Chromatography B

Year:

2006

Language:

english

File:

PDF, 300 KB

english, 2006

23

Deciphering transcriptional networks that governCoffea arabicaseed development using combined cDNA array and real-time RT-PCR approaches

Jordi Salmona, Stéphane Dussert, Frédéric Descroix, Alexandre de Kochko, Benoît Bertrand, Thierry Joët

Journal:

Plant Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.13 MB

english, 2008

24

Encyclopedia of Virology || PLANT PARARETROVIRUSES (CAULIMOVIRIDAE) | Cassava Vein Mosaic Virus

de Kochko, Alexandre

Year:

1999

File:

PDF, 423 KB

1999

25

Isolation and genetic mapping of aCoffea canephoraphenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acids

Venkataramaiah Mahesh, Jean Jacques Rakotomalala, Lénaïg Le Gal, Hélène Vigne, Alexandre de Kochko, Serge Hamon, Michel Noirot, Claudine Campa

Journal:

Plant Cell Reports

Year:

2006

Language:

english

File:

PDF, 362 KB

english, 2006

26

Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species

Belzile, Francois, Poncet, Valérie, Dufour, Magali, Hamon, Perla, Hamon, Serge, de Kochko, Alexandre, Leroy, Thierry

Journal:

Year:

2007

Language:

english

File:

PDF, 159 KB

english, 2007

27

Active transposable elements recover species boundaries and geographic structure in Madagascan coffee species

Roncal, Julissa, Guyot, Romain, Hamon, Perla, Crouzillat, Dominique, Rigoreau, Michel, Konan, Olivier N’Guessan, Rakotomalala, Jean-Jacques, Nowak, Michael D., Davis, Aaron P., de Kochko, Alexandre

Journal:

Molecular Genetics and Genomics

Year:

2016

Language:

english

File:

PDF, 848 KB

english, 2016

28

Development of solid-phase extraction and methylation procedures to analyse free fatty acids in lipid-rich seeds

Andréina Laffargue, Alexandre de Kochko, Stéphane Dussert

Journal:

Plant Physiology and Biochemistry

Year:

2007

Language:

english

File:

PDF, 260 KB

english, 2007

29

Two novel Ty1-copiaretrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in theCoffeagenus (Rubiaceae)

Perla Hamon, Pierre-Olivier Duroy, Christine Dubreuil-Tranchant, Paulo Mafra D’Almeida Costa, Caroline Duret, Norosoa J. Razafinarivo, Emmanuel Couturon, Serge Hamon, Alexandre de Kochko, Valérie Ponc

Journal:

Molecular Genetics and Genomics

Year:

2011

Language:

english

File:

PDF, 708 KB

english, 2011

30

Favourable habitats for Coffea inter-specific hybridization in central New Caledonia: combined genetic and spatial analyses

Céline Gomez, Ahmed Batti, Daniel Le Pierrès, Claudine Campa, Serge Hamon, Alexandre De Kochko, Perla Hamon, Frédéric Huynh, Marc Despinoy, Valérie Poncet

Journal:

Journal of Applied Ecology

Year:

2010

Language:

english

File:

PDF, 608 KB

english, 2010

31

Characterization of the genome of rice tungro bacilliform virus: Comparison with Commelina yellow mottle virus and caulimoviruses

Rongda Qu, Maitrayee Bhattacharyya, Gary S. Laco, Alexandre De Kochko, B.L. Subba Rao, Maria B. Kaniewska, J. Scott Elmer, Dean E. Rochester, Christine E. Smith, Roger N. Beachy

Journal:

Year:

1991

Language:

english

File:

PDF, 1.04 MB

english, 1991

32

Metabolic Pathways in Tropical Dicotyledonous Albuminous Seeds: Coffea arabica as a Case Study

Thierry Joët, Andréina Laffargue, Jordi Salmona, Sylvie Doulbeau, Frédéric Descroix, Benoît Bertrand, Alexandre de Kochko and Stéphane Dussert

Journal:

New Phytologist

Year:

2009

Language:

english

File:

PDF, 4.03 MB

english, 2009

33

Characterization of the protease domain of Rice tungro bacilliform virus responsible for the processing of the capsid protein from the polyprotein

Philippe Marmey, Ana Rojas-Mendoza, Alexandre de Kochko, Roger N Beachy…

Journal:

Virology Journal

Year:

2005

Language:

english

File:

PDF, 1.55 MB

english, 2005

34

Site-Specific Insertion Polymorphism of the MITE Alex-1 in the Genus Coffea Suggests Interspecific Gene Flow

Dubreuil-Tranchant, Christine, Guyot, Romain, Guellim, Amira, Duret, Caroline, de la Mare, Marion, Razafinarivo, Norosoa, Poncet, Valérie, Hamon, Serge, Hamon, Perla, de Kochko, Alexandre

Journal:

International Journal of Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 954 KB

english, 2011

35

[Advances in Botanical Research] Volume 53 || Advances in Coffea Genomics

Kochko, Alexandre De

Year:

2010

Language:

english

File:

PDF, 1.18 MB

english, 2010

36

Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species

Gomez, Céline, Despinoy, Marc, Hamon, Serge, Hamon, Perla, Salmon, Danyela, Akaffou, Doffou Sélastique, Legnate, Hyacinthe, de Kochko, Alexandre, Mangeas, Morgan, Poncet, Valérie

Journal:

Ecology and Evolution

Year:

2016

Language:

english

File:

PDF, 1.69 MB

english, 2016

37

Characterization, high-resolution mapping and differential expression of three homologousPALgenes inCoffea canephoraPierre (Rubiaceae)

Maud Lepelley, Venkataramaiah Mahesh, James McCarthy, Michel Rigoreau, Dominique Crouzillat, Nathalie Chabrillange, Alexandre de Kochko, Claudine Campa

Journal:

Year:

2012

Language:

english

File:

PDF, 596 KB

english, 2012

38

First report on mangiferin (C-glucosyl-xanthone) isolated from leaves of a wild coffee plant, Coffea pseudozanguebariae (Rubiaceae)

Talamond, Pascale, Mondolot, Laurence, Gargadennec, Annick, de Kochko, Alexandre, Hamon, Serge, Fruchier, Alain, Campa, Claudine

Journal:

Acta Botanica Gallica

Year:

2008

Language:

english

File:

PDF, 266 KB

english, 2008

39

The Amborella vacuolar processing enzyme family

Poncet, Valérie, Scutt, Charlie, Tournebize, Rémi, Villegente, Matthieu, Cueff, Gwendal, Rajjou, Loïc, Balliau, Thierry, Zivy, Michel, Fogliani, Bruno, Job, Claudette, de Kochko, Alexandre, Sarramegna

Journal:

Frontiers in Plant Science

Year:

2015

Language:

english

File:

PDF, 1.79 MB

english, 2015

40

Partial sequencing reveals the transposable element composition ofCoffeagenomes and provides evidence for distinct evolutionary stories

Guyot, Romain, Darré, Thibaud, Dupeyron, Mathilde, de Kochko, Alexandre, Hamon, Serge, Couturon, Emmanuel, Crouzillat, Dominique, Rigoreau, Michel, Rakotomalala, Jean-Jacques, Raharimalala, Nathalie E

Journal:

Molecular Genetics and Genomics

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

41

Molecular characterization of an ethylene receptor gene (CcETR1) in coffee trees, its relationship with fruit development and caffeine content

José Bustamante-Porras, Claudine Campa, Valérie Poncet, Michel Noirot, Thierry Leroy, Serge Hamon, Alexandre de Kochko

Journal:

Molecular Genetics and Genomics

Year:

2007

Language:

english

File:

PDF, 624 KB

english, 2007

42

Functional characterization of twop-coumaroyl ester 3′-hydroxylase genes from coffee tree: evidence of a candidate for chlorogenic acid biosynthesis

Venkataramaiah Mahesh, Rachel Million-Rousseau, Pascaline Ullmann, Nathalie Chabrillange, José Bustamante, Laurence Mondolot, Marc Morant, Michel Noirot, Serge Hamon, Alexandre de Kochko, Danièle Werc

Journal:

Plant Molecular Biology

Year:

2007

Language:

english

File:

PDF, 529 KB

english, 2007

43

A rapid and efficient method for the isolation of restrictable total DNA from plants of the genusAbelmoschus

Alexandre de Kochko, Serge Hamon

Journal:

Plant Molecular Biology Reporter

Year:

1990

Language:

english

File:

PDF, 624 KB

english, 1990

44

Microcollinearity in an ethylene receptor coding gene region of theCoffea canephoragenome is extensively conserved withVitis viniferaand other distant dicotyledonous sequenced genomes

Romain Guyot, Marion de la Mare, Véronique Viader, Perla Hamon, Olivier Coriton, José Bustamante-Porras, Valérie Poncet, Claudine Campa, Serge Hamon, Alexandre de Kochko

Journal:

BMC Plant Biology

Year:

2009

Language:

english

File:

PDF, 1.11 MB

english, 2009

45

Effectiveness of the fatty acid and sterol composition of seeds for the chemotaxonomy of Coffea subgenus Coffea

Stéphane Dussert, Andréina Laffargue, Alexandre de Kochko, Thierry Joët

Journal:

Year:

2008

Language:

english

File:

PDF, 404 KB

english, 2008

46

Analysis of a large number of independent transgenic rice plants produced by the biolistic method

Rongda Qu, Alexandre de Kochko, Lanying Zhang, Philippe Marmey, Liangcai Li, Wenzhong Tian, Shiping Zhang, Claude M. Fauquet, Roger N. Beachy

Journal:

In Vitro Cellular & Developmental Biology - Plant

Year:

1996

Language:

english

File:

PDF, 2.67 MB

english, 1996

47

Current genetic differentiation ofCoffea canephoraPierre ex A. Froehn in the Guineo-Congolian African zone: cumulative impact of ancient climatic changes and recent human activities

Céline Gomez, Stéphane Dussert, Perla Hamon, Serge Hamon, Alexandre de Kochko, Valérie Poncet

Journal:

BMC Evolutionary Biology

Year:

2009

Language:

english

File:

PDF, 942 KB

english, 2009

48

Inheritance and relationship between key agronomic and quality traits in an interspecific cross betweenCoffea pseudozanguebariaeBridson andC. canephoraPierre

Doffou Sélastique Akaffou, Perla Hamon, Sylvie Doulbeau, Jules Keli, Hyacinthe Legnate, Claudine Campa, Serge Hamon, Alexandre de Kochko, Bi Irié Arsène Zoro

Journal:

Tree Genetics & Genomes

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

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